CDS

Accession Number TCMCG005C21187
gbkey CDS
Protein Id XP_020268988.1
Location complement(join(30894307..30894454,30897210..30897289,30901730..30901783,30902299..30902385,30902495..30902593,30903400..30903471,30903568..30903657,30904662..30904826,30908143..30908233,30909563..30909663,30911008..30911061,30911149..30911232,30911323..30911369,30913017..30913122,30913326..30913421,30913550..30913619,30914167..30914252,30914334..30914403,30920727..30920806,30921012..30921101,30922678..30922752,30923757..30923861,30923863..30923914,30924003..30924109))
Gene LOC109844392
GeneID 109844392
Organism Asparagus officinalis

Protein

Length 702aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA376608;
db_source XM_020413399.1
Definition LOW QUALITY PROTEIN: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase DHX35
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13117        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCCCAGTTCTGGAAGCCAGGCTCCGACCGCCCGAAGGCGGTCATCGTCGACGACGAGGAGGGCGGCGTCCTCTTCTACTCTGCTCTCCCCTCGGGCTCATCTCGGTATGGGCGGCCGACGATGGAGAAGCAGAAGCAGAGGCTGGGGGGNNNNNNNNNGGTGTACAAGTACCGGAATGCGATTCTTTACCTTGTGGAGAATCACGCGACGACGATCGTTGTCGGAGAGACTGGCAGTGGAAAGACCACTCAAATCCCTCAGTATCTTAAGGAGGCAGGTTGGGCTGATGGTGGCCGGGTTATAGCTTGTACTCAGCCTAGGAGATTAGCTGTACAGTCGGTTGCTTCTCGTGTAGCTGAGGAGATGGATGTTAATTTGGGAGAAGAAGTTGGGTACACTATTCGTTTTGACGACCAAACAAATCCGGAGGCAACAAAGATCAAGTTTCTTACTGATGGTGTATTGCTTAGAGAAATGATGAATGATCCTCTTCTCACCAAATATAGTGTCATAATGGTGGATGAGGCTCACGAAAGATCCCTCTCAACTGACATGCTACTGGGCCTCCTGAAAAAGATCCAACGTCGTAGACCTGAATTGCGTCTAATCATATCTTCTGCAACAATTGAGGCAAAATCCATGGCAAAATTTTTCCATATCAGAAAGAAGAATCAGGTGGAGGCCTCTGAAGACTCTGTTCCCAAGAAAATGCCGGCTATTCTTTCTGTAGAAGGTAAAAGCTATCCAGTAGAAATTCATTACCTTGAGGAGCCTACCTCGGATTATGTCCAAGCAGTTGTTAGTACTGTGAAGTCGATTCATGATGAGGAATCACAAGGCGACATTCTTGTATTCCTGACAGGTCAAGATGATATTGATGCTGCTGTACAATTACTTACAGATGATGCTCGAGACAATAGGAGACACTCTTCTGGGTTGCTGATTTTACCATTGTACTCAGGACTTTCACGTGCAGACCAGGACTTAGTGTTTGCTCCAACCCCCAAGGGGAAAAGGAAAGTTATCATATCAACCAATATTGCTGAAACATCATTGACTTTGGAGGGAGTGGTTTACGTTGTAGATAGTGGTTTCTCCAAGCAGCGGTTTTATAATCCGGTTTCTGATATCGAGAATTTGGTGGTTGCACCAATATCAAAGGCGTCTGCGAAACAAAGGGCAGGGAGAGCTGGAAGAATAAGACCAGGGAAGTGTTTTAGGCTATATACAGAAGATTATTTCCAGAAGGAAATGCCTGCAGAGGGAGTTCCAGAAATGCAAAGGTCAAACCTTGTCTCTTGTGTAATCCAATTAAAGGCTCTAGGCATAGATAACATTTTGGGCTTTGATTGGCCAGCTTCTCCTTCACCAGAGGCAATGGTGAGAGCACTCGAGGTTCTCTACTCCCTGGAGATTCTTGACGAAGATGCCAAGCTCACTTCGCCTACTGGTTTTCAAGTTGCTGAGATTCCTTTGGACCCTATGATTGCAAAGATGATATTATCAGCAAATACTCTTGGATGCTCTGAGGAAATAATTACTATTGCAGCAGTGCTATCTGTTCAGTCTATCTGGGTTCCTCTTCGGGGAACCAAAAAAGAATTTGATGAAGTAAAGCTTCGGTTCGCTGCTGCAGAGGGAGATCATGTGTCGTTCTTAAATATCTATAAAGGATTTCTGAACTCTGGGAAATCGTCACAGTGGTGCTATAAGAACTATATAAATTACCATGCTATGAAGAAAGTCATTGATATAAGAGAACAACTAAGCACACTGTTAAAGCGGCTTGGCATAGTTTTGAAATCATGTGAACGGGATACAGAGGCATTAAGGAAGGCAATCATCACTGGATTTTTTGCTCATGCATGCCACTTGGAGGAATTTAGTCAGAATGGAATGTACAAGACTATAAGGAGTTCTCAAGAAGTATATATTCATCCATCATCTGTGCTCTTCAGGGTTAACCCAAAGTGGGTAGTGTACAATTCACTGGTATCTACAGACAAGCATTACATGCGTAATGTTATCTCCATCGACCCATCATGGCTTCTTGAAGCCGCACCTCATTTCTATCAGCAACGTACTCTGAACCCTGCTCTCTTTTGA
Protein:  
MSQFWKPGSDRPKAVIVDDEEGGVLFYSALPSGSSRYGRPTMEKQKQRLGGXXXVYKYRNAILYLVENHATTIVVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQSVASRVAEEMDVNLGEEVGYTIRFDDQTNPEATKIKFLTDGVLLREMMNDPLLTKYSVIMVDEAHERSLSTDMLLGLLKKIQRRRPELRLIISSATIEAKSMAKFFHIRKKNQVEASEDSVPKKMPAILSVEGKSYPVEIHYLEEPTSDYVQAVVSTVKSIHDEESQGDILVFLTGQDDIDAAVQLLTDDARDNRRHSSGLLILPLYSGLSRADQDLVFAPTPKGKRKVIISTNIAETSLTLEGVVYVVDSGFSKQRFYNPVSDIENLVVAPISKASAKQRAGRAGRIRPGKCFRLYTEDYFQKEMPAEGVPEMQRSNLVSCVIQLKALGIDNILGFDWPASPSPEAMVRALEVLYSLEILDEDAKLTSPTGFQVAEIPLDPMIAKMILSANTLGCSEEIITIAAVLSVQSIWVPLRGTKKEFDEVKLRFAAAEGDHVSFLNIYKGFLNSGKSSQWCYKNYINYHAMKKVIDIREQLSTLLKRLGIVLKSCERDTEALRKAIITGFFAHACHLEEFSQNGMYKTIRSSQEVYIHPSSVLFRVNPKWVVYNSLVSTDKHYMRNVISIDPSWLLEAAPHFYQQRTLNPALF